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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ChIP-seq
33
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
131
DNA binding
34
Transcription
14
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
33
control
29
narrow histone mark
29
transcription factor
17
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
178
bam
163
fastq
145
bigWig
112
bed narrowPeak
80
bigBed narrowPeak
33
tsv
1
csv
Organism
179
Homo sapiens
Biosample type
81
tissue
75
primary cell
23
cell line
Organ
125
pancreas
63
epithelium
23
adipose tissue
23
connective tissue
18
blood
18
bodily fluid
7
spleen
5
liver
Project
179
AMP
Genome assembly (visualization)
145
GRCh38
145
hg19
Lab
179
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
179 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
spleen
7
+ See 1 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
3
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
cell line
GM12878
18
HepG2
5
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