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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
26
total RNA-seq
22
ATAC-seq
4
single cell RNA-seq
Assay category
41
DNA binding
30
Transcription
22
DNA accessibility
Target of assay
39
histone
39
histone modification
23
broad histone mark
16
narrow histone mark
2
control
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
93
fastq
90
bam
89
bigWig
58
bed narrowPeak
29
tsv
20
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
1
csv
Organism
93
Homo sapiens
Biosample type
76
primary cell
17
tissue
Organ
78
pancreas
62
epithelium
10
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
93
AMP
Genome assembly (visualization)
89
GRCh38
88
hg19
Lab
92
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
36
missing controlled_by
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
1
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
tissue
brain
9
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
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