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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
146
total RNA-seq
63
ChIP-seq
49
single cell RNA-seq
14
ATAC-seq
Assay category
201
DNA accessibility
195
Transcription
63
DNA binding
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
454
bam
446
bigWig
256
bed narrowPeak
224
bigBed narrowPeak
190
tsv
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
123
fastq
1
csv
Organism
459
Homo sapiens
Biosample type
283
tissue
176
primary cell
Organ
233
pancreas
114
epithelium
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
459
AMP
Genome assembly (visualization)
446
GRCh38
423
hg19
Lab
459
AMP-T2D consortium
Audit category:
32
inconsistent ontology term
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
459 results
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Clear Filters
DNase-seq
total RNA-seq
ChIP-seq
single cell RNA-seq
ATAC-seq
tissue
islet of Langerhans
120
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
pancreatic ductal cell
4
13
3
4
pancreatic beta cell
10
9
4
pancreatic alpha cell
10
7
3
pancreatic acinar cell
2
8
5
3
pancreatic endocrine cell
11
+ See 33 more…
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