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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
4
ATAC-seq
1
Hi-C
1
single cell RNA-seq
Assay category
11
DNA binding
4
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
11
histone
11
histone modification
7
broad histone mark
4
narrow histone mark
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
13
fastq
12
bam
11
bed narrowPeak
11
bigWig
1
bed broadPeak
1
bedpe
1
csv
1
hic
Organism
17
Homo sapiens
Biosample type
12
primary cell
5
tissue
Organ
77
pancreas
epithelium
Project
17
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
12
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
11
missing controlled_by
organ_slims!
epithelium
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
single cell RNA-seq
primary cell
pancreatic endocrine cell
11
pancreatic cell
1
tissue
islet of Langerhans
4
1
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