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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
226
ChIP-seq
28
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
226
DNA binding
29
Transcription
14
DNA accessibility
Target of assay
154
histone
154
histone modification
94
broad histone mark
60
narrow histone mark
52
control
20
transcription factor
16
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
268
bam
216
bigWig
188
bed narrowPeak
156
bigBed narrowPeak
133
fastq
28
tsv
1
csv
Organism
269
Homo sapiens
Biosample type
189
tissue
80
primary cell
Organ
127
pancreas
68
epithelium
50
blood vessel
50
vasculature
28
brain
23
adipose tissue
23
connective tissue
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
Project
269
AMP
Genome assembly (visualization)
216
hg19
215
GRCh38
Lab
269
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
269 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
body of pancreas
35
ascending aorta
16
endocrine pancreas
16
thoracic aorta
16
temporal lobe
15
+ See 10 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
3
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
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