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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
102
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
88
histone
88
histone modification
53
broad histone mark
35
narrow histone mark
12
control
2
RNA binding protein
2
transcription factor
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
142
bam
130
bigWig
104
bed narrowPeak
73
fastq
72
bigBed narrowPeak
26
tsv
1
csv
Organism
143
Homo sapiens
Biosample type
78
primary cell
65
tissue
Organ
74
pancreas
66
epithelium
blood vessel
50
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
Project
143
AMP
Genome assembly (visualization)
130
hg19
129
GRCh38
Lab
143
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
32
missing controlled_by
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
tissue
temporal lobe
15
angular gyrus
13
germinal matrix
12
right atrium auricular region
10
muscle of leg
7
+ See 2 more…
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