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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ATAC-seq
82
ChIP-seq
1
pCHi-C
Assay category
Transcription
114
DNA accessibility
82
DNA binding
Target of assay
59
histone
59
histone modification
42
narrow histone mark
23
control
17
broad histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
141
bam
118
bigWig
73
bed narrowPeak
50
tagAlign
46
fastq
14
bigBed narrowPeak
1
tsv
Organism
197
Homo sapiens
Biosample type
146
primary cell
50
tissue
1
cell line
Organ
51
liver
46
pancreas
35
epithelium
Project
197
AMP
Genome assembly (visualization)
118
hg19
65
GRCh38
Lab
197
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_slims!
Transcription
BIOSAMPLE
ASSAY
197 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
pancreatic ductal cell
4
13
macrophage
11
pancreatic acinar cell
3
8
+ See 28 more…
tissue
liver
50
cell line
HepG2
1
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