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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
61
ChIP-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
191
Transcription
100
DNA accessibility
61
DNA binding
Target of assay
38
histone
38
histone modification
31
narrow histone mark
23
control
7
broad histone mark
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
294
bam
271
bigWig
189
tsv
50
tagAlign
38
bed narrowPeak
12
fastq
1
csv
Organism
353
Homo sapiens
Biosample type
193
tissue
159
primary cell
1
cell line
Organ
194
liver
72
pancreas
epithelium
Project
308
AMP
45
T1D
Genome assembly (visualization)
271
hg19
218
GRCh38
Lab
308
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
11
missing controlled_by
organ_slims!
epithelium
BIOSAMPLE
ASSAY
353 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
single cell RNA-seq
tissue
liver
143
50
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
pancreatic endocrine cell
11
B cell
2
2
+ See 26 more…
cell line
HepG2
1
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