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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
208
total RNA-seq
197
ChIP-seq
48
ATAC-seq
17
pCHi-C
1
DNAme array
1
single cell RNA-seq
Assay category
48
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
27
bam
27
bed narrowPeak
19
bigWig
14
bigBed narrowPeak
14
fastq
Organism
48
Homo sapiens
Biosample type
27
primary cell
16
cell line
5
in vitro differentiated cells
Organ
30
epithelium
30
pancreas
Project
48
AMP
Genome assembly (visualization)
32
hg19
27
GRCh38
Lab
43
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ATAC-seq
primary cell
monocyte
13
pancreatic beta cell
4
pancreatic ductal cell
4
pancreatic acinar cell
3
pancreatic alpha cell
3
cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
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