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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ATAC-seq
52
total RNA-seq
41
WGBS
35
single cell RNA-seq
ChIP-seq
22
snATAC-seq
Assay category
113
DNA accessibility
87
Transcription
41
DNA methylation
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
134
zippedFastqFolder
65
fastq
64
bam
60
bigWig
52
bed narrowPeak
26
tsv
14
bigBed narrowPeak
7
txt
1
bed bed3+
1
csv
Organism
241
Homo sapiens
Biosample type
175
primary cell
66
tissue
Organ
144
pancreas
120
epithelium
40
liver
2
musculature of body
Project
134
HPAP
107
AMP
Genome assembly (visualization)
79
hg19
40
GRCh38
Lab
134
Klaus Kaestner, Upenn
43
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
1
audit script error
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
241 results
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Clear Filters
ATAC-seq
total RNA-seq
WGBS
single cell RNA-seq
snATAC-seq
primary cell
pancreatic alpha cell
25
10
25
Langerhans cell
33
21
pancreatic beta cell
17
10
16
pancreatic acinar cell
7
2
pancreatic ductal cell
4
4
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tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
1
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