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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
30
total RNA-seq
15
ATAC-seq
1
DNase-seq
1
single cell RNA-seq
Assay category
32
DNA binding
31
Transcription
16
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
78
bam
77
bigWig
73
fastq
48
bed narrowPeak
30
tsv
15
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
csv
Organism
79
Homo sapiens
Biosample type
79
primary cell
6
cell line
4
tissue
Organ
72
pancreas
61
epithelium
6
connective tissue
Project
79
AMP
Genome assembly (visualization)
78
GRCh38
78
hg19
Lab
79
AMP-T2D consortium
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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