Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
41
single cell RNA-seq
32
ChIP-seq
ATAC-seq
Assay category
83
Transcription
32
DNA binding
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
97
fastq
58
bam
58
bigWig
32
bed narrowPeak
26
tsv
19
zippedFastqFolder
1
csv
Organism
115
Homo sapiens
Biosample type
115
primary cell
Organ
74
pancreas
63
epithelium
Project
59
AMP
56
HPAP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
59
AMP-T2D consortium
56
Klaus Kaestner, Upenn
Audit category:
32
missing controlled_by
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
115 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
25
pancreatic ductal cell
4
13
pancreatic beta cell
11
pancreatic endocrine cell
11
+ See 2 more…
See all biosamples
Download