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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
19
total RNA-seq
11
ChIP-seq
1
Hi-C
1
single cell RNA-seq
Assay category
25
DNA accessibility
20
Transcription
11
DNA binding
1
3D chromatin structure
Target of assay
11
histone
11
histone modification
7
broad histone mark
4
narrow histone mark
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
55
bam
36
bed narrowPeak
30
bigWig
19
tsv
12
fastq
1
bedpe bed3+
1
csv
1
hic
Organism
57
Homo sapiens
Biosample type
40
tissue
12
primary cell
5
in vitro differentiated cells
Organ
127
pancreas
epithelium
1
adipose tissue
1
connective tissue
Project
57
AMP
Genome assembly (visualization)
56
hg19
55
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
11
missing controlled_by
organ_slims!
epithelium
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
single cell RNA-seq
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
primary cell
pancreatic endocrine cell
11
pancreatic cell
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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