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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
Hi-C
Assay category
6
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
3
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
80
May, 2022
52
February, 2023
17
May, 2021
16
September, 2020
12
August, 2017
10
October, 2019
6
February, 2021
6
July, 2019
6
November, 2020
4
November, 2019
3
August, 2021
3
December, 2017
3
October, 2022
2
June, 2019
1
December, 2019
1
March, 2020
1
May, 2019
0
September, 2018
Available data
93
bam
bigWig
61
fastq
56
bed narrowPeak
29
tsv
28
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
hic
1
tar
Organism
10
Homo sapiens
Biosample type
10
primary cell
Organ
21
eye
17
limb
11
blood vessel
11
nerve
11
vasculature
10
brain
10
epithelium
10
pancreas
8
kidney
6
vein
5
artery
4
gonad
4
ovary
1
connective tissue
1
heart
1
liver
1
lymph node
1
pituitary gland
1
skin of body
Project
10
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
primary cell
endothelial cell of umbilical vein
5
1
Liver fetal (hepatocyte)
1
epithelial cell of proximal tubule
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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