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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
21
ATAC-seq
15
ChIP-seq
1
single cell RNA-seq
Assay category
27
Transcription
21
DNA accessibility
15
DNA binding
Target of assay
32
histone
32
histone modification
broad histone mark
15
narrow histone mark
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
63
fastq
62
bigWig
55
bam
29
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
63
Homo sapiens
Biosample type
63
primary cell
Organ
62
pancreas
58
epithelium
Project
56
AMP
7
HPAP
Genome assembly (visualization)
62
GRCh38
55
hg19
Lab
56
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
15
missing controlled_by
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
63 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
10
8
pancreatic beta cell
10
6
pancreatic ductal cell
4
4
7
pancreatic acinar cell
2
3
4
pancreatic endocrine cell
4
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