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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
3
ATAC-seq
Assay category
Transcription
24
DNA binding
3
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
27
fastq
24
bam
19
bigWig
16
bed narrowPeak
Organism
27
Homo sapiens
Biosample type
24
in vitro differentiated cells
3
primary cell
Organ
9
embryo
3
epithelium
3
pancreas
Project
24
AMP
3
HPAP
Genome assembly (visualization)
19
GRCh38
16
hg19
Lab
24
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
2
inconsistent control read length
assay_slims!
Transcription
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
1
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