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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
total RNA-seq
106
ATAC-seq
41
single cell RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
109
Transcription
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
74
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
92
fastq
4
tsv
4
txt
Organism
109
Homo sapiens
Biosample type
92
primary cell
13
tissue
4
in vitro differentiated cells
Organ
58
pancreas
55
epithelium
4
bone element
4
connective tissue
4
eye
4
skeleton
Project
92
HPAP
12
AMP
5
T1D
Lab
92
Klaus Kaestner, Upenn
12
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
109 results
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Clear Filters
total RNA-seq
primary cell
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
ilium
1
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in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
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