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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
14
ATAC-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
58
Transcription
16
DNA accessibility
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
56
fastq
3
bigWig
Organism
74
Homo sapiens
Biosample type
56
primary cell
18
tissue
1
cell line
Organ
75
pancreas
71
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
56
HPAP
18
T1D
1
AMP
Genome assembly (visualization)
3
GRCh38
Lab
56
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
1
AMP-T2D consortium
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
ATAC-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
42
2
pancreatic beta cell
11
1
tissue
islet of Langerhans
5
11
2
cell line
EndoC_BH1
1
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