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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
23
ChIP-seq
3
ATAC-seq
3
single cell RNA-seq
Assay category
190
DNA accessibility
23
DNA binding
3
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
4
RNA binding protein
4
transcription factor
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
221
bam
216
bigWig
210
bed narrowPeak
210
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
45
fastq
19
zippedFastqFolder
3
tsv
1
bedpe bed3+
Organism
216
Homo sapiens
Biosample type
163
tissue
53
primary cell
Organ
80
kidney
41
musculature of body
33
heart
32
limb
30
brain
24
epithelium
18
ureter
15
connective tissue
10
pancreas
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
213
AMP
3
HPAP
Genome assembly (visualization)
216
GRCh38
190
hg19
Lab
213
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
22
inconsistent ontology term
BIOSAMPLE
ASSAY
216 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
pancreatic alpha cell
2
2
cardiac muscle cell
1
2
+ See 20 more…
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