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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
7
ATAC-seq
Assay category
56
Transcription
7
DNA accessibility
3D chromatin structure
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
316
August, 2021
309
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
100
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
42
fastq
19
zippedFastqFolder
3
bigWig
1
bam
1
bed broadPeak
Organism
63
Homo sapiens
Biosample type
59
primary cell
4
tissue
Organ
23
pancreas
19
epithelium
Project
59
HPAP
4
AMP
Genome assembly (visualization)
5
GRCh38
2
hg19
Lab
59
Klaus Kaestner, Upenn
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
63 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
islet of Langerhans
4
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