Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
74
single cell RNA-seq
42
total RNA-seq
41
WGBS
22
snATAC-seq
Assay category
116
Transcription
41
DNA methylation
22
DNA accessibility
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
114
zippedFastqFolder
44
fastq
7
txt
6
bam
1
bed bed3+
Organism
179
Homo sapiens
Biosample type
151
primary cell
28
tissue
Organ
63
pancreas
57
epithelium
20
liver
2
musculature of body
Project
151
HPAP
28
AMP
Genome assembly (visualization)
1
hg19
Lab
151
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
179 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
73
21
pancreatic alpha cell
15
25
pancreatic beta cell
1
16
tissue
liver
20
islet of Langerhans
6
skeletal muscle tissue
1
1
Download