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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
41
single cell RNA-seq
32
ChIP-seq
17
ATAC-seq
Assay category
83
Transcription
32
DNA binding
17
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
114
fastq
75
bigWig
72
bam
46
bed narrowPeak
26
tsv
19
zippedFastqFolder
14
bigBed narrowPeak
1
csv
Organism
132
Homo sapiens
Biosample type
132
primary cell
Organ
91
pancreas
80
epithelium
Project
73
AMP
59
HPAP
Genome assembly (visualization)
75
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
59
Klaus Kaestner, Upenn
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
132 results
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total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
25
5
pancreatic ductal cell
4
13
4
pancreatic beta cell
11
5
pancreatic acinar cell
2
8
3
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