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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
78
DNA binding
Target of assay
360
transcription factor
89
recombinant protein
78
control
64
RNA binding protein
30
chromatin remodeller
26
histone
26
histone modification
13
broad histone mark
13
narrow histone mark
2
other context
2
other post-translational modification
Date released
56
November, 2017
9
October, 2019
4
August, 2021
3
February, 2021
3
January, 2019
3
November, 2018
Available data
74
bam
62
fastq
13
bigWig
4
tagAlign
Organism
78
Homo sapiens
Biosample type
187
tissue
78
cell line
33
in vitro differentiated cells
14
primary cell
1
stem cell
Organ
60
liver
11
pancreas
6
blood
6
bodily fluid
epithelium
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
78
AMP
Genome assembly (visualization)
13
hg19
Lab
74
AMP-T2D consortium
4
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
cell line
HepG2
60
GM12878
6
Panc1
6
smooth muscle cell of the coronary artery
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
iPSC derived cell line
1
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