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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
21
total RNA-seq
4
WGBS
1
DNase-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
65
DNA binding
22
Transcription
4
DNA methylation
1
DNA accessibility
Target of assay
45
control
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
Date released
34
August, 2017
23
May, 2020
20
May, 2022
12
December, 2017
1
February, 2020
1
February, 2021
1
July, 2019
1
March, 2020
Available data
43
tagAlign
42
bam
20
fastq
2
tsv
1
csv
Organism
93
Homo sapiens
Biosample type
93
tissue
71
cell line
1
in vitro differentiated cells
1
primary cell
Organ
207
kidney
200
heart
122
brain
93
liver
92
pancreas
88
bone element
65
connective tissue
64
adipose tissue
63
blood vessel
63
vasculature
46
artery
26
eye
26
limb
21
musculature of body
20
lung
12
nerve
11
spleen
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
93
AMP
Genome assembly (visualization)
hg19
238
GRCh38
Lab
73
AMP-T2D consortium
20
Karen Mohlke, UNC
organ_slims!
mammary gland
assembly!
hg19
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
total RNA-seq
WGBS
DNase-seq
pCHi-C
single cell RNA-seq
tissue
liver
62
20
3
1
1
right lobe of liver
3
1
1
1
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