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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
25
DNA binding
6
Transcription
Target of assay
13
histone
13
histone modification
9
narrow histone mark
8
control
4
broad histone mark
4
transcription factor
Date released
13
December, 2017
13
February, 2018
5
May, 2021
1
January, 2018
Available data
31
bam
27
fastq
23
bigWig
16
bed narrowPeak
6
tsv
3
bed bed3+
3
tagAlign
Organism
32
Homo sapiens
Biosample type
505
tissue
346
primary cell
100
cell line
32
in vitro differentiated cells
Organ
97
connective tissue
29
embryo
24
epithelium
15
liver
3
pancreas
1
adipose tissue
1
heart
Project
32
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
1
hg18
Lab
32
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
organ_slims!
small intestine
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
4
1
Hepatic endoderm
4
pancreatic PP cell
3
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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