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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
97
histone
97
histone modification
49
broad histone mark
47
narrow histone mark
46
transcription factor
33
control
9
RNA binding protein
2
chromatin remodeller
Date released
16
August, 2017
10
May, 2021
8
February, 2018
7
August, 2021
6
December, 2017
Available data
33
bam
32
bed narrowPeak
32
bigWig
26
fastq
11
tagAlign
4
bed bed3+
Organism
47
Homo sapiens
Biosample type
324
tissue
80
primary cell
47
in vitro differentiated cells
13
cell line
1
stem cell
Organ
16
connective tissue
8
embryo
epithelium
5
liver
1
pancreas
Project
47
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
37
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
organ_slims!
stomach
epithelium
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
posterior foregut
1
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