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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ATAC-seq
62
ChIP-seq
Assay category
112
DNA accessibility
62
DNA binding
Target of assay
57
histone
57
histone modification
32
broad histone mark
25
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
64
August, 2021
40
May, 2024
28
February, 2023
20
August, 2017
20
May, 2022
1
April, 2019
1
November, 2017
Available data
bam
1702
bigWig
1062
tsv
884
bed narrowPeak
499
bigBed narrowPeak
377
fastq
238
tagAlign
208
bed broadPeak
200
bed bed3+
171
bigBed broadPeak
157
txt
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
10
hic
9
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
174
Homo sapiens
Biosample type
174
tissue
30
primary cell
14
cell line
4
in vitro differentiated cells
Organ
76
heart
64
kidney
35
artery
35
blood vessel
vasculature
27
eye
20
liver
13
musculature of body
12
epithelium
6
pancreas
2
adipose tissue
2
connective tissue
1
brain
Project
174
AMP
Genome assembly (visualization)
104
GRCh38
70
hg19
Lab
64
Katalin Susztak, Upenn
50
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
organ_slims!
vasculature
files.file_type!
bam
BIOSAMPLE
ASSAY
174 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney
64
left cardiac atrium
40
liver
20
retina
15
skeletal muscle tissue
13
pigmented layer of retina
12
islet of Langerhans
6
adipose tissue
1
cingulate gyrus
1
heart left ventricle
1
subcutaneous abdominal adipose tissue
1
See all biosamples
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