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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
Assay category
67
DNA binding
Target of assay
53
histone
53
histone modification
28
narrow histone mark
25
broad histone mark
14
transcription factor
2
chromatin remodeller
1
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
27
August, 2017
November, 2017
4
October, 2017
3
November, 2018
1
December, 2017
Available data
67
fastq
66
bam
64
bigWig
38
bed narrowPeak
10
bed bed3+
5
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
67
Homo sapiens
Biosample type
44
primary cell
14
tissue
6
in vitro differentiated cells
3
cell line
Organ
54
pancreas
21
epithelium
17
connective tissue
adipose tissue
4
brain
3
liver
1
embryo
Project
67
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
67
AMP-T2D consortium
Audit category:
67
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
organ_slims!
adipose tissue
month_released!
November, 2017
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
islet of Langerhans
10
brain
4
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
cell line
HepG2
3
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