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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
DNase-seq
25
ChIP-seq
Assay category
167
DNA accessibility
25
DNA binding
Target of assay
25
histone
25
histone modification
14
broad histone mark
11
narrow histone mark
Date released
162
June, 2019
19
August, 2017
6
November, 2017
5
October, 2019
Available data
2343
bam
2133
bigWig
1509
bed narrowPeak
931
tsv
923
bigBed narrowPeak
fastq
290
tagAlign
270
bed broadPeak
234
bigBed broadPeak
230
bed bed3+
161
txt
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
18
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
192
Homo sapiens
Biosample type
191
tissue
primary cell
1
cell line
Organ
68
kidney
45
musculature of body
36
limb
31
brain
27
heart
18
ureter
11
pancreas
5
blood vessel
5
vasculature
4
artery
3
eye
adipose tissue
2
connective tissue
2
nerve
Project
192
AMP
Genome assembly (visualization)
176
hg19
172
GRCh38
Lab
192
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
adipose tissue
biosample_type!
primary cell
files.file_type!
fastq
BIOSAMPLE
ASSAY
192 results
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DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 40 more…
cell line
Panc1
1
See all biosamples
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