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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
64
ATAC-seq
50
total RNA-seq
6
snATAC-seq
2
Hi-C
Assay category
156
Transcription
70
DNA accessibility
2
3D chromatin structure
Date released
241
October, 2019
228
August, 2021
227
August, 2017
193
May, 2020
162
June, 2019
159
February, 2021
120
July, 2018
115
May, 2019
94
February, 2023
82
November, 2017
80
April, 2019
67
July, 2019
66
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
November, 2019
38
March, 2020
25
November, 2018
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
99
tsv
64
bed narrowPeak
64
xls
57
txt
1
bedpe bed3+
1
hic
Organism
228
Homo sapiens
Biosample type
228
tissue
44
cell line
42
in vitro differentiated cells
4
primary cell
Organ
128
kidney
92
heart
6
blood vessel
6
vasculature
2
artery
2
pancreas
adipose tissue
1
connective tissue
Project
228
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
128
Katalin Susztak, Upenn
98
AMP-T2D consortium
2
Bing Ren, UCSD
organ_slims!
adipose tissue
esophagus
BIOSAMPLE
ASSAY
228 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
tissue
kidney
8
64
49
6
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
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