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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ATAC-seq
Assay category
5
DNA accessibility
Date released
3
February, 2023
1
March, 2019
1
October, 2017
Available data
310
bigWig
274
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
tissue
Organ
2
pancreas
Project
5
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
organ_slims!
adipose tissue
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
5 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
islet of Langerhans
2
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