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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
total RNA-seq
85
single cell RNA-seq
77
ATAC-seq
41
WGBS
22
snATAC-seq
Assay category
231
Transcription
99
DNA accessibility
41
DNA methylation
Date released
406
November, 2017
399
May, 2021
354
August, 2017
341
May, 2020
329
February, 2021
318
August, 2021
313
October, 2019
217
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
96
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
73
September, 2018
63
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
191
bam
187
bigWig
167
tsv
134
zippedFastqFolder
77
fastq
38
bed narrowPeak
7
txt
1
bed bed3+
Organism
371
Homo sapiens
Biosample type
186
tissue
185
primary cell
Organ
264
pancreas
116
epithelium
40
liver
3
connective tissue
2
musculature of body
adipose tissue
Project
237
AMP
134
HPAP
Genome assembly (visualization)
206
hg19
167
GRCh38
Lab
173
AMP-T2D consortium
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
1
audit script error
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
371 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
tissue
islet of Langerhans
126
18
liver
20
20
skeletal muscle tissue
1
1
primary cell
pancreatic alpha cell
9
22
25
Langerhans cell
33
21
pancreatic beta cell
9
13
16
pancreatic acinar cell
6
4
pancreatic delta cell
4
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