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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
DNase-seq
65
ChIP-seq
1
Hi-C
Assay category
186
DNA accessibility
65
DNA binding
1
3D chromatin structure
Target of assay
32
transcription factor
19
histone
19
histone modification
12
control
11
narrow histone mark
8
broad histone mark
6
RNA binding protein
2
chromatin remodeller
Date released
406
November, 2017
399
May, 2021
354
August, 2017
341
May, 2020
329
February, 2021
318
August, 2021
313
October, 2019
217
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
96
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
73
September, 2018
63
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
251
bam
239
bed narrowPeak
239
bigBed narrowPeak
239
bigWig
186
bed bed3+
186
bed broadPeak
186
bigBed broadPeak
35
fastq
Organism
252
Homo sapiens
Biosample type
169
tissue
55
primary cell
28
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
27
blood
27
bodily fluid
20
epithelium
18
connective tissue
18
ureter
7
eye
7
spleen
7
vasculature
5
blood vessel
4
pancreas
3
liver
2
artery
adipose tissue
Project
252
AMP
Genome assembly (visualization)
239
GRCh38
216
hg19
Lab
252
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
1
inconsistent control
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
252 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
cell line
GM12878
27
HepG2
1
See all biosamples
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