Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
15
RRBS
15
small RNA-seq
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
53
Transcription
15
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
3
control
Date released
406
November, 2017
399
May, 2021
351
August, 2017
341
May, 2020
323
February, 2021
318
August, 2021
313
October, 2019
217
June, 2019
204
February, 2023
168
July, 2018
159
May, 2022
120
May, 2019
94
December, 2017
84
July, 2019
80
April, 2019
80
November, 2018
73
September, 2018
63
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
65
bigWig
61
bam
53
tsv
15
bed bedMethyl
15
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
55
tissue
29
primary cell
Organ
18
brain
18
connective tissue
17
heart
13
epithelium
adipose tissue
11
kidney
10
vasculature
9
blood vessel
9
liver
9
musculature of body
6
pancreas
4
limb
3
artery
2
pericardium
1
eye
Project
84
AMP
Genome assembly (visualization)
79
hg19
59
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
adipose tissue
assay_title!
WGBS
BIOSAMPLE
ASSAY
84 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
RRBS
small RNA-seq
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
2
body of pancreas
2
2
gastrocnemius medialis
4
right lobe of liver
2
2
frontal cortex
1
1
1
+ See 20 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
+ See 19 more…
See all biosamples
Download