Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
14
small RNA-seq
13
RRBS
8
Hi-C
4
WGBS
3
single cell RNA-seq
2
ATAC-seq
2
FAIRE-seq
Assay category
42
Transcription
17
DNA methylation
8
3D chromatin structure
4
DNA accessibility
Target of assay
3
control
Date released
406
November, 2017
396
May, 2021
354
August, 2017
341
May, 2020
305
October, 2019
263
February, 2021
226
August, 2021
200
May, 2022
182
June, 2019
168
February, 2023
168
July, 2018
99
May, 2019
94
December, 2017
87
November, 2018
73
September, 2018
71
July, 2019
60
November, 2019
59
September, 2020
56
March, 2020
53
October, 2018
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
22
October, 2017
20
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
52
bigWig
49
bam
42
tsv
15
bed bedMethyl
15
bigBed bedMethyl
4
bed bed3+
4
hdf5
3
bed narrowPeak
2
bigBed narrowPeak
Organism
71
Homo sapiens
Biosample type
47
tissue
24
primary cell
Organ
heart
18
brain
18
connective tissue
13
epithelium
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
71
AMP
Genome assembly (visualization)
62
hg19
46
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
adipose tissue
heart
BIOSAMPLE
ASSAY
71 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
RRBS
Hi-C
WGBS
single cell RNA-seq
ATAC-seq
FAIRE-seq
tissue
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
frontal cortex
1
1
1
liver
2
1
+ See 18 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
+ See 14 more…
See all biosamples
Download