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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
WGBS
19
RRBS
1
DNAme array
Assay category
1324
Transcription
1206
DNA binding
795
DNA accessibility
84
DNA methylation
30
3D chromatin structure
Date released
41
May, 2022
25
July, 2019
6
February, 2021
6
November, 2018
5
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
31
bed bedMethyl
31
bigBed bedMethyl
15
bam
15
fastq
14
bigWig
6
tsv
Organism
84
Homo sapiens
Biosample type
57
primary cell
27
tissue
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
liver
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
37
AMP
Genome assembly (visualization)
17
hg19
14
GRCh38
Lab
47
Klaus Kaestner, Upenn
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
adipose tissue
liver
BIOSAMPLE
ASSAY
84 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
skeletal muscle tissue
4
pancreas
2
1
aorta
2
body of pancreas
2
+ See 9 more…
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