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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
13
ChIP-seq
2
Hi-C
Assay category
25
DNA accessibility
20
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
399
May, 2021
341
May, 2020
318
August, 2021
313
October, 2019
284
February, 2021
217
June, 2019
176
May, 2022
128
February, 2023
120
May, 2019
118
July, 2018
96
July, 2019
85
August, 2017
82
November, 2017
80
April, 2019
63
March, 2020
60
November, 2019
47
September, 2023
40
May, 2024
23
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
14
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
2
January, 2018
1
August, 2022
Available data
58
bam
36
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
60
Homo sapiens
Biosample type
39
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
pancreas
16
epithelium
adipose tissue
1
connective tissue
Project
60
AMP
Genome assembly (visualization)
58
hg19
56
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
organ_slims!
adipose tissue
target.investigated_as!
other post-translational modification
files.file_type!
fastq
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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