Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
838
histone modification
837
histone
443
transcription factor
432
narrow histone mark
405
broad histone mark
282
control
93
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
37
November, 2017
21
November, 2018
6
January, 2019
6
October, 2018
5
May, 2019
4
April, 2019
4
August, 2017
4
June, 2019
2
December, 2017
2
December, 2018
1
August, 2021
1
November, 2019
Available data
92
bam
90
bigWig
89
bed narrowPeak
86
bigBed narrowPeak
78
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
93
Homo sapiens
Biosample type
65
cell line
18
tissue
in vitro differentiated cells
10
primary cell
Organ
56
liver
10
blood
10
bodily fluid
9
pancreas
6
connective tissue
6
epithelium
6
heart
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
93
AMP
Genome assembly (visualization)
89
hg19
84
GRCh38
Lab
92
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
organ_slims!
adipose tissue
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
93 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
54
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
heart left ventricle
3
islet of Langerhans
2
ascending aorta
1
coronary artery
1
+ See 6 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
See all biosamples
Download