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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
1
pCHi-C
Assay category
4
3D chromatin structure
Date released
2
March, 2020
2
October, 2019
1
August, 2018
Available data
291
bam
259
bigWig
141
fastq
132
bed narrowPeak
131
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
5
Homo sapiens
Biosample type
10
tissue
5
in vitro differentiated cells
4
primary cell
2
cell line
Organ
1
adipose tissue
1
connective tissue
Project
5
AMP
Genome assembly (visualization)
4
hg19
Lab
5
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
adrenal gland
files.file_type!
ibed
BIOSAMPLE
ASSAY
5 results
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Hi-C
pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
white fat cell
1
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