Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
Hi-C
3
pCHi-C
Assay category
13
3D chromatin structure
Date released
10
March, 2020
3
October, 2019
1
August, 2018
1
August, 2021
1
November, 2019
Available data
2420
bam
2270
bigWig
1274
tsv
1244
bed narrowPeak
651
fastq
623
bigBed narrowPeak
309
tagAlign
244
bed bed3+
238
bed broadPeak
201
bigBed broadPeak
161
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
16
bedpe bed3+
15
hic
11
bed bed3
7
bed bedgraph
7
csv
3
hdf5
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
16
Homo sapiens
Biosample type
9
tissue
7
in vitro differentiated cells
Organ
7
pancreas
epithelium
3
heart
2
blood vessel
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
16
AMP
Genome assembly (visualization)
14
hg19
Lab
15
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
organ_slims!
adrenal gland
epithelium
liver
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
Hi-C
pCHi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
white fat cell
1
See all biosamples
Download