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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
134
Transcription
17
DNA methylation
Date released
48
July, 2018
44
April, 2018
22
September, 2020
18
February, 2021
8
November, 2018
4
August, 2017
3
August, 2018
3
June, 2018
1
September, 2018
Available data
212
tsv
151
fastq
124
bam
123
bigWig
93
zippedFastqFolder
17
bed bedMethyl
17
bigBed bedMethyl
3
csv
Organism
151
Homo sapiens
Biosample type
134
primary cell
16
tissue
1
cell line
Organ
85
pancreas
72
epithelium
6
connective tissue
3
adipose tissue
2
liver
2
spleen
Project
111
AMP
40
HPAP
Genome assembly (visualization)
107
GRCh38
98
hg19
Lab
111
AMP-T2D consortium
40
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
organ_slims!
adrenal gland
kidney
BIOSAMPLE
ASSAY
151 results
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single cell RNA-seq
WGBS
primary cell
Langerhans cell
34
pancreatic alpha cell
12
6
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic acinar cell
9
+ See 12 more…
tissue
islet of Langerhans
6
adipose tissue
3
body of pancreas
2
pancreas
2
spleen
2
+ See 1 more…
cell line
HepG2
1
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