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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
total RNA-seq
22
ChIP-seq
5
ATAC-seq
Assay category
84
Transcription
22
DNA binding
5
DNA accessibility
Target of assay
histone
21
histone modification
16
transcription factor
11
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
111
May, 2021
31
August, 2017
28
August, 2021
26
February, 2021
23
February, 2018
19
December, 2017
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
88
bigWig
84
bam
79
tsv
5
tagAlign
4
bed narrowPeak
Organism
111
Homo sapiens
Biosample type
111
in vitro differentiated cells
88
primary cell
40
tissue
20
cell line
Organ
4
epithelium
2
embryo
2
pancreas
1
connective tissue
1
heart
Project
111
AMP
Genome assembly (visualization)
88
hg19
83
GRCh38
Lab
84
AMP-T2D consortium
27
Kyle Gaulton, UCSD
Audit category:
68
inconsistent ontology term
organ_slims!
adrenal gland
target.investigated_as!
histone
BIOSAMPLE
ASSAY
111 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
17
5
induced pluripotent stem cell
9
pancreatic PP cell
2
cardiac fibroblast
1
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