Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
5
DNase-seq
4
single cell RNA-seq
4
total RNA-seq
2
WGBS
1
ATAC-seq
1
FAIRE-seq
Assay category
65
DNA binding
8
Transcription
7
DNA accessibility
3D chromatin structure
2
DNA methylation
Target of assay
50
histone
50
histone modification
31
broad histone mark
19
narrow histone mark
12
control
3
RNA binding protein
3
transcription factor
Date released
45
May, 2019
20
October, 2019
6
July, 2019
4
August, 2021
3
June, 2019
3
November, 2017
March, 2020
1
February, 2020
Available data
77
bam
62
bigWig
55
bed narrowPeak
54
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
8
tsv
5
bed bed3+
3
fastq
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
82
Homo sapiens
Biosample type
57
tissue
25
primary cell
Organ
924
pancreas
785
liver
681
connective tissue
511
epithelium
490
adipose tissue
385
heart
351
kidney
281
brain
229
vasculature
223
blood vessel
159
bone element
artery
118
limb
87
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
24
spleen
20
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
82
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
82
AMP-T2D consortium
organ_slims!
artery
assay_slims!
3D chromatin structure
month_released!
March, 2020
BIOSAMPLE
ASSAY
82 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
WGBS
ATAC-seq
FAIRE-seq
tissue
aorta
13
4
2
ascending aorta
16
1
2
thoracic aorta
16
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
brain microvascular endothelial cell
3
1
kidney capillary endothelial cell
1
Download