Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
37
DNase-seq
35
ATAC-seq
25
total RNA-seq
4
Hi-C
4
pCHi-C
1
WGBS
Assay category
72
DNA accessibility
45
DNA binding
25
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
12
control
Date released
64
October, 2019
35
June, 2019
31
February, 2023
7
May, 2019
6
February, 2021
5
July, 2019
3
February, 2020
Available data
101
bed narrowPeak
91
bam
73
bigWig
67
bigBed narrowPeak
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
11
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
151
Homo sapiens
Biosample type
151
tissue
5
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
313
heart
299
kidney
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
151
AMP
Genome assembly (visualization)
105
hg19
78
GRCh38
Lab
151
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
artery
assay_title!
GRO-seq
BIOSAMPLE
ASSAY
151 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
WGBS
tissue
tibial nerve
35
2
1
5
islet of Langerhans
3
1
14
4
muscle of leg
7
13
1
retina
3
15
3
muscle of arm
17
+ See 10 more…
See all biosamples
Download