Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
234
ChIP-seq
Assay category
234
DNA binding
Target of assay
227
histone
227
histone modification
142
narrow histone mark
85
broad histone mark
5
transcription factor
2
control
Date released
89
May, 2021
40
October, 2019
38
August, 2017
27
May, 2020
18
November, 2017
15
August, 2021
6
October, 2017
1
February, 2021
Available data
2931
bigWig
2905
bam
1559
bed narrowPeak
1348
tsv
1008
fastq
938
bigBed narrowPeak
294
bed broadPeak
258
bigBed broadPeak
246
bed bed3+
234
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
228
Homo sapiens
Biosample type
105
tissue
99
primary cell
17
in vitro differentiated cells
13
cell line
Organ
43
brain
42
liver
14
pancreas
13
musculature of body
5
epithelium
artery
4
blood vessel
4
heart
4
vasculature
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
150
AMP
84
T1D
Genome assembly (visualization)
242
GRCh38
234
hg19
Lab
150
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
organ_slims!
artery
BIOSAMPLE
ASSAY
234 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
27
skeletal muscle tissue
13
brain
6
islet of Langerhans
6
pancreas
6
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
12
cardiomyocytes
3
pancreatic PP cell
2
cell line
HepG2
12
iPSC derived cell line
1
See all biosamples
Download