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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
53
transcription factor
48
histone
48
histone modification
26
narrow histone mark
22
broad histone mark
5
RNA binding protein
5
control
3
chromatin remodeller
Date released
115
October, 2019
60
August, 2017
52
May, 2021
32
May, 2019
27
May, 2020
23
April, 2019
15
December, 2017
15
September, 2018
14
November, 2017
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
1
October, 2017
Available data
26
bed narrowPeak
26
bigWig
24
bam
15
fastq
9
tagAlign
7
bed bed3+
7
bigBed narrowPeak
Organism
26
Homo sapiens
Biosample type
19
in vitro differentiated cells
2
cell line
2
primary cell
2
tissue
1
stem cell
Organ
11
liver
9
epithelium
4
embryo
Project
26
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
24
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
organ_slims!
artery
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
7
hepatocyte
5
Hepatic endoderm
2
pancreatic endoderm
2
Posterior foregut
1
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cell line
HepG2
2
primary cell
hepatocyte
2
tissue
right lobe of liver
2
stem cell
hESC
1
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