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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
12
ATAC-seq
11
ChIP-seq
2
Capture-C
2
Hi-C
Assay category
15
Transcription
12
DNA accessibility
11
DNA binding
2
3D chromatin structure
Target of assay
18
histone
histone modification
11
narrow histone mark
11
transcription factor
7
broad histone mark
1
RNA binding protein
Date released
510
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
166
June, 2019
164
July, 2018
153
August, 2017
88
July, 2019
71
November, 2018
49
April, 2018
49
November, 2019
47
December, 2017
45
February, 2023
43
October, 2019
42
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
29
March, 2020
19
January, 2019
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
4
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
28
bigWig
25
bam
23
bed narrowPeak
15
tsv
2
bed bed3+
2
hic
1
bedpe bed3+
Organism
42
Homo sapiens
Biosample type
21
in vitro differentiated cells
20
cell line
1
tissue
Organ
12
liver
8
embryo
4
connective tissue
1
kidney
Project
42
AMP
Genome assembly (visualization)
89
GRCh38
42
hg19
Lab
25
AMP-T2D consortium
12
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
organ_slims!
artery
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
42 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Capture-C
Hi-C
in vitro differentiated cells
neural progenitor cell
7
10
adipocyte
1
1
osteoblast
1
1
cell line
HepG2
11
1
H1-hESC
8
tissue
kidney
1
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