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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
Hi-C
1
whole genome sequencing assay
Assay category
1
3D chromatin structure
1
DNA sequencing
Date released
1
August, 2021
1
October, 2019
Available data
516
bam
466
bigWig
427
fastq
392
bed narrowPeak
355
bigBed narrowPeak
67
tsv
59
bed broadPeak
59
bigBed broadPeak
14
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
2
Homo sapiens
Biosample type
4
primary cell
2
cell line
Organ
1
liver
1
pancreas
Project
2
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
organ_slims!
artery
BIOSAMPLE
ASSAY
2 results
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Hi-C
whole genome sequencing assay
cell line
HepG2
1
Panc1
1
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