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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
219
ChIP-seq
30
total RNA-seq
21
ATAC-seq
8
DNase-seq
5
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
21
DNA accessibility
Date released
100
May, 2020
77
May, 2022
76
August, 2021
65
February, 2023
34
May, 2021
26
November, 2019
21
October, 2019
14
February, 2021
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
5
August, 2017
5
July, 2019
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
5
bam
5
bed narrowPeak
4
bigWig
3
bigBed narrowPeak
Organism
21
Homo sapiens
Biosample type
15
tissue
4
in vitro differentiated cells
2
primary cell
Organ
3
connective tissue
3
pancreas
2
limb
1
adipose tissue
artery
1
blood vessel
1
brain
1
epithelium
1
eye
1
liver
1
nerve
1
pituitary gland
1
skin of body
1
vasculature
Project
21
AMP
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
artery
files.file_type!
txt
BIOSAMPLE
ASSAY
21 results
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ATAC-seq
tissue
islet of Langerhans
13
adipose tissue
1
tibial nerve
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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