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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
5
DNase-seq
5
Hi-C
5
total RNA-seq
4
single cell RNA-seq
2
WGBS
1
ATAC-seq
1
FAIRE-seq
1
pCHi-C
Assay category
65
DNA binding
Target of assay
50
histone
50
histone modification
31
broad histone mark
19
narrow histone mark
12
control
3
RNA binding protein
3
transcription factor
Date released
45
May, 2019
17
October, 2019
3
November, 2017
Available data
65
bam
51
bigWig
48
bed narrowPeak
48
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
fastq
Organism
65
Homo sapiens
Biosample type
45
tissue
20
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
65
AMP
Genome assembly (visualization)
51
hg19
48
GRCh38
Lab
65
AMP-T2D consortium
organ_slims!
artery
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
tissue
ascending aorta
16
thoracic aorta
16
aorta
13
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
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